BioDockify
Dashboard

MD Simulation

GPU-powered all-atom simulations via RunPod. GROMACS Engine · NVIDIA RTX 4090 · Auto-scaling Compute.

MD Simulation Parameters
GROMACS + CUDA GPU
Click to upload receptor
Click to upload ligand
RunPod GPU Infrastructure
Dedicated NVIDIA RTX 4090 · Real-time status sync · Automatic result retrieval
Job Log
# BioDockify MD Console v9.2
# Waiting for submission...

MD Pipeline (v9.2)

Phase 1Pod Provisioning & Input Sync
Phase 2NVIDIA GPU Acceleration Boot
Phase 3GROMACS Production MD
Phase 4Trajectory Upload to VPS
Phase 5Analysis & Result Archival